Index _ | A | C | D | F | G | H | I | K | M | N | O | P | R | S | T | U | V | W | Z _ __getitem__() (iohub.clearcontrol.ClearControlFOV method) A append_channel() (iohub.ngff.Position method) array_keys() (iohub.ngff.NGFFNode method) C channel_index() (iohub.clearcontrol.ClearControlFOV method) (iohub.mmstack.MMOmeTiffFOV method) (iohub.ndtiff.NDTiffFOV method) channel_names (iohub.clearcontrol.ClearControlFOV property) ClearControlFOV (class in iohub.clearcontrol) close() (iohub.mmstack.MMStack method) (iohub.ngff.NGFFNode method) create_image() (iohub.ngff.Position method) create_position() (iohub.ngff.Plate method) create_well() (iohub.ngff.Plate method) create_zeros() (iohub.ngff.Position method) D data (iohub.ngff.Position property) dump_meta() (iohub.ngff.NGFFNode method) (iohub.ngff.Plate method) (iohub.ngff.Position method) F frame_metadata() (iohub.mmstack.MMOmeTiffFOV method) (iohub.ndtiff.NDTiffFOV method) from_positions() (iohub.ngff.Plate class method) G get() (iohub.mmstack.MMStack method) (iohub.ndtiff.NDTiffDataset method) get_array() (iohub._deprecated.singlepagetiff.MicromanagerSequenceReader method) (iohub._deprecated.upti.UPTIReader method) get_channel_index() (iohub.ngff.NGFFNode method) get_image() (iohub._deprecated.singlepagetiff.MicromanagerSequenceReader method) (iohub._deprecated.upti.UPTIReader method) get_image_metadata() (iohub.ndtiff.NDTiffDataset method) get_num_positions() (iohub._deprecated.singlepagetiff.MicromanagerSequenceReader method) (iohub._deprecated.upti.UPTIReader method) get_zarr() (iohub._deprecated.singlepagetiff.MicromanagerSequenceReader method) (iohub._deprecated.upti.UPTIReader method) group_keys() (iohub.ngff.NGFFNode method) H hcs_position_labels (iohub._deprecated.singlepagetiff.MicromanagerSequenceReader property) (iohub._deprecated.upti.UPTIReader property) (iohub.mmstack.MMStack property) (iohub.ndtiff.NDTiffDataset property) I images() (iohub.ngff.Position method) initialize_pyramid() (iohub.ngff.Position method) iohub module is_leaf() (iohub.ngff.NGFFNode method) is_root() (iohub.ngff.NGFFNode method) items() (iohub.mmstack.MMStack method) (iohub.ndtiff.NDTiffDataset method) K keys() (iohub.mmstack.MMStack method) (iohub.ndtiff.NDTiffDataset method) M make_tiles() (iohub.ngff.TiledPosition method) metadata() (iohub.clearcontrol.ClearControlFOV method) micromanager_summary (iohub.mmstack.MMStack property) (iohub.ndtiff.NDTiffDataset property) MicromanagerSequenceReader (class in iohub._deprecated.singlepagetiff) MMOmeTiffFOV (class in iohub.mmstack) MMStack (class in iohub.mmstack) module iohub N NDTiffDataset (class in iohub.ndtiff) NDTiffFOV (class in iohub.ndtiff) NGFFNode (class in iohub.ngff) O open_ome_zarr() (in module iohub) P Plate (class in iohub.ngff) Position (class in iohub.ngff) positions() (iohub.ngff.Plate method) print_tree() (iohub.ngff.NGFFNode method) R read_image_metadata() (iohub.mmstack.MMStack method) read_images() (in module iohub) read_tiff_series() (iohub._deprecated.singlepagetiff.MicromanagerSequenceReader method) rename_channel() (iohub.ngff.Position method) root (iohub.mmstack.MMStack property) (iohub.ndtiff.NDTiffDataset property) rows() (iohub.ngff.Plate method) S scale (iohub.clearcontrol.ClearControlFOV property) (iohub.ngff.Position property) set_transform() (iohub.ngff.Position method) shape (iohub._deprecated.singlepagetiff.MicromanagerSequenceReader property) (iohub._deprecated.upti.UPTIReader property) (iohub.clearcontrol.ClearControlFOV property) str_channel_axis (iohub.ndtiff.NDTiffDataset property) str_position_axis (iohub.ndtiff.NDTiffDataset property) T t_scale (iohub.clearcontrol.ClearControlFOV property) (iohub.mmstack.MMOmeTiffFOV property) (iohub.ndtiff.NDTiffFOV property) TiledPosition (class in iohub.ngff) U update_channel() (iohub.ngff.Position method) UPTIReader (class in iohub._deprecated.upti) V values() (iohub.mmstack.MMStack method) (iohub.ndtiff.NDTiffDataset method) version (iohub.ngff.NGFFNode property) W wells() (iohub.ngff.Plate method) Z zattrs (iohub.ngff.NGFFNode property) zgroup (iohub.ngff.NGFFNode property) zyx_scale (iohub.clearcontrol.ClearControlFOV property) (iohub.mmstack.MMOmeTiffFOV property) (iohub.mmstack.MMStack property) (iohub.ndtiff.NDTiffDataset property) (iohub.ndtiff.NDTiffFOV property)