Examples¶

A gallery of examples to showcase how iohub can be used.

OME-Zarr Writing¶

• Single-FOV OME-Zarr - Create, read, append, and modify a single-FOV dataset
• Multi-FOV HCS OME-Zarr - Write a high content screening dataset with multiple wells
• Large Array OME-Zarr - Store larger-than-RAM arrays
• Tiled OME-Zarr - Create a tiled single-resolution dataset
• Update OME-Zarr - Convert between OME-Zarr versions

Transforms and Pyramids¶

• Coordinate Transform - Write FOVs with different coordinate transformations
• Create Pyramid - Create a multiscale pyramid for visualization

Legacy Formats¶

• View ClearControl Dataset - Open and view a ClearControl dataset